Longstem water-wort is an emergent/floating aquatic forb with 3 petals and 3 sepals. Its seeds are axile, set at different levels in the fruit, marked with transversely elongate, 6-sided areoles, the angular ends of the areoles dovetailed with those of adjacent rows, the longitudinal ridges appearing narrow or broken. Its leaves are linear to obovate, 3-8mm long.
It can be distinguished from Elatine minima, which is the only other species of this genera in Wisconsin, by its fruits, which are three-lobed. (A microscope will likely be necessary to examine these traits.)