| Bradley Creek | Bradley Creek | 0.00 | 6.16 | 6.16 | RIVER | 288700 | Portage, Waupaca | 2025 | Good | CLASS I | ERW | 
| Camp F Creek | Camp F Creek | 0.00 | 4.28 | 4.28 | RIVER | 290900 | Marathon | 2023 | Good | CLASS I | ERW | 
| Cleveland Creek | Cleveland Creek | 0.00 | 3.37 | 3.37 | RIVER | 286100 | Shawano | 2005 | Unknown | CLASS II |  | 
| Comet Creek | Comet Creek | 0.00 | 8.03 | 8.03 | RIVER | 285600 | Marathon, Shawano, Waupaca | 2025 | Good | CLASS I | ERW | 
| Comet Creek | Comet Creek | 8.03 | 12.24 | 4.21 | RIVER | 285600 | Marathon, Shawano, Waupaca | 2024 | Good | CLASS I |  | 
| Comet Creek | Comet Creek | 12.24 | 26.63 | 14.39 | RIVER | 285600 | Marathon, Shawano, Waupaca | 2023 | Good | CLASS I | ERW | 
| Crow Lake | Crow Lake |  |  | 8.82 | LAKE | 183900 | Marathon | 2004 | Unknown |  |  | 
| Flume Creek | Flume Creek | 0.00 | 4.61 | 4.61 | RIVER | 286600 | Marathon, Portage, Waupaca | 2025 | Good | CLASS II |  | 
| Flume Creek | Flume Creek | 4.61 | 7.54 | 2.93 | RIVER | 286600 | Marathon, Portage, Waupaca | 2022 | Good | CLASS I | ERW | 
| Flume Creek | Flume Creek | 7.54 | 13.44 | 5.90 | RIVER | 286600 | Marathon, Portage, Waupaca | 2025 | Good | CLASS I |  | 
| Flume Creek | Flume Creek | 13.44 | 24.17 | 10.73 | RIVER | 286600 | Marathon, Portage, Waupaca | 2025 | Good | CLASS I | ERW | 
| Fox Lake | Fox Lake |  |  | 8.01 | LAKE | 985500 | Marathon | 2012 | Good |  |  | 
| Goin Lake | Goin Caw Lake |  |  | 21.08 | LAKE | 186600 | Portage | 2016 | Good |  |  | 
| Holt Creek | Holt Creek | 0.00 | 0.20 | 0.20 | RIVER | 289200 | Marathon, Portage | 2023 | Excellent |  |  | 
| Holt Creek | Holt Creek | 0.63 | 8.56 | 7.93 | RIVER | 289200 | Marathon, Portage | 2024 | Good | CLASS I | ORW | 
| Jackson Creek | Jackson Creek | 0.00 | 3.52 | 3.52 | RIVER | 288400 | Shawano, Waupaca | 2023 | Excellent | CLASS I | ORW | 
| Jackson Creek | Jackson Creek | 3.53 | 5.91 | 2.38 | RIVER | 288400 | Shawano, Waupaca |  | Unknown | CLASS II |  | 
| Jackson Lake | Jackson Lake |  |  | 10.76 | LAKE | 188500 | Waupaca | 2001 | Unknown |  |  | 
| Jones Creek | Jones Creek | 0.00 | 1.28 | 1.28 | RIVER | 285700 | Waupaca | 2023 | Unknown | CLASS I | ERW | 
| Klondike Creek | Klondike Creek | 0.00 | 3.57 | 3.57 | RIVER | 289300 | Marathon, Portage | 2022 | Fair | CLASS I | ERW | 
| Klondike Creek | Klondike Creek | 3.57 | 4.08 | 0.52 | RIVER | 289300 | Marathon, Portage |  | Unknown |  |  | 
| Lake Helen | Lake Helen County Park Beach | 0.00 | 0.02 | 0.02 | INLAND BEACH | 287200 | Portage | 2025 | Unknown |  |  | 
| Lake Helen | Helen Lake |  |  | 88.79 | LAKE | 287200 | Portage | 2025 | Good |  |  | 
| Leitzke Creek | Leitzke Creek | 0.00 | 1.43 | 1.43 | RIVER | 286000 | Shawano | 2005 | Unknown | CLASS II |  | 
| Lilly Lake | Lilly Lake |  |  | 81.69 | LAKE | 286400 | Marathon | 2020 | Good |  |  | 
| Lions Lake | Lions Lake |  |  | 44.51 | LAKE | 288800 | Portage | 2017 | Good |  |  | 
| Little Frog Lake | Little Frog Lake |  |  | 25.63 | LAKE | 999200 | Marathon | 2016 | Good |  |  | 
| Little Wolf River | Little Wolf River | 15.50 | 37.85 | 22.35 | RIVER | 272400 | Marathon, Portage, Waupaca | 2020 | Good |  |  | 
| Little Wolf River | Little Wolf River | 37.85 | 49.81 | 11.96 | RIVER | 272400 | Marathon, Portage, Waupaca | 2023 | Good | CLASS II |  | 
| Little Wolf River | Little Wolf River | 49.81 | 50.99 | 1.18 | RIVER | 272400 | Marathon, Portage, Waupaca | 2025 | Excellent | CLASS I | ORW | 
| Little Wolf River | Little Wolf River | 50.99 | 51.61 | 0.62 | RIVER | 272400 | Marathon, Portage, Waupaca |  | Unknown | CLASS I | ERW | 
| Little Wolf River | Little Wolf River | 51.61 | 51.92 | 0.31 | RIVER | 272400 | Marathon, Portage, Waupaca |  | Unknown | CLASS I | ORW | 
| Little Wolf River | Little Wolf River | 51.92 | 53.84 | 1.92 | RIVER | 272400 | Marathon, Portage, Waupaca |  | Good | CLASS I | ERW | 
| Little Wolf River | Little Wolf River | 53.83 | 55.20 | 1.37 | RIVER | 272400 | Marathon, Portage, Waupaca | 2005 | Good |  |  | 
| Little Wolf River | Little Wolf River | 55.20 | 55.84 | 0.64 | RIVER | 272400 | Marathon, Portage, Waupaca |  | Unknown | CLASS I | ERW | 
| Little Wolf River | Little Wolf River | 55.83 | 64.73 | 8.90 | RIVER | 272400 | Marathon, Portage, Waupaca | 2025 | Good | CLASS II |  | 
| Little Wolf River | Little Wolf River | 64.73 | 66.99 | 2.26 | RIVER | 272400 | Marathon, Portage, Waupaca | 2023 | Unknown | CLASS I | ERW | 
| Long Lake | Long Lake |  |  | 10.15 | LAKE | 191300 | Marathon | 2012 | Fair |  |  | 
| Moen Lake | Moen Lake |  |  | 37.20 | LAKE | 291300 | Marathon | 2017 | Good |  |  | 
| Moss Lake | Moss Lake |  |  | 21.71 | LAKE | 193000 | Marathon | 2016 | Fair |  |  | 
| Mud Lake | Mud Lake |  |  | 29.00 | LAKE | 285500 | Waupaca | 2012 | Fair |  |  | 
| Mud Lake | Mud Lake |  |  | 15.70 | LAKE | 289600 | Portage | 2012 | Good |  |  | 
| Mud Lake | Mud Lake |  |  | 10.67 | LAKE | 193600 | Portage | 2011 | Unknown |  |  | 
| Mud Lake | Mud Lake |  |  | 15.26 | LAKE | 193700 | Portage | 2010 | Unknown |  |  | 
| Penny Lake | Penny Lake |  |  | 10.92 | LAKE | 195500 | Portage | 2020 | Good |  |  | 
| Rainy Creek | Rainy Creek | 0.00 | 2.09 | 2.09 | RIVER | 287500 | Portage | 2024 | Good | CLASS I | ERW | 
| Rosholt Millpond | Rosholt Millpond |  |  | 18.08 | IMPOUNDMENT | 287800 | Portage | 2012 | Good |  |  | 
| Stenson Lake | Stenson Lake |  |  | 55.66 | LAKE | 199300 | Marathon | 2017 | Fair |  |  | 
| Tree Lake | Peterson Park Beach | 0.00 | 0.06 | 0.06 | INLAND BEACH | 289400 | Portage | 2024 | Unknown |  |  | 
| Tree Lake | Tree Lake |  |  | 73.24 | LAKE | 289400 | Portage | 2025 | Excellent |  |  | 
| Turtle Lake | Turtle Lake |  |  | 3.55 | LAKE | 1023400 | Marathon |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 0.08 | LAKE | 238300 | Marathon |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 0.18 | LAKE | 238400 | Marathon |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 0.13 | LAKE | 238500 | Marathon |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 0.84 | LAKE | 285100 | Waupaca | 2004 | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 2.09 | LAKE | 287400 | Portage |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 1.21 | LAKE | 290600 | Marathon |  | Unknown |  |  | 
| Unnamed | Creek 27-13 T27n R10e | 0.00 | 0.47 | 0.47 | RIVER | 3000158 | Marathon |  | Unknown |  | ERW | 
| Unnamed | Creek 15-3? | 0.00 | 0.81 | 0.81 | RIVER | 290800 | Marathon |  | Unknown |  | ERW | 
| Unnamed | Creek 35-8 (T27n, R10e) | 0.00 | 0.85 | 0.85 | RIVER | 3000200 | Marathon |  | Unknown | CLASS I |  | 
| Unnamed | Un Creek 22-13 (T26n-R10e-S22 | 0.00 | 0.95 | 0.95 | RIVER | 290300 | Marathon |  | Unknown | CLASS I | ERW | 
| Unnamed | Un Creek 20-9 (T26n-R10e-S20) | 0.00 | 0.98 | 0.98 | RIVER | 290100 | Marathon | 2023 | Unknown | CLASS I | ERW | 
| Unnamed | Creek 20-16 (T26n, R11e) | 0.00 | 1.08 | 1.08 | RIVER | 286075 | Shawano | 2024 | Unknown | CLASS I | ERW | 
| Unnamed | Creek 27-13 T27n R10e | 0.00 | 1.13 | 1.13 | RIVER | 286500 | Marathon | 2005 | Unknown | CLASS I | ERW | 
| Unnamed | Creek 36-15 (T26n, R10e) | 0.00 | 1.16 | 1.16 | RIVER | 289000 | Marathon, Shawano | 2022 | Unknown | CLASS I |  | 
| Unnamed | Un Creek (T26n-R10e-S15 | 0.00 | 1.35 | 1.35 | RIVER | 290700 | Marathon |  | Unknown | CLASS I | ERW | 
| Unnamed | Unnamed | 0.00 | 2.36 | 2.36 | RIVER | 285800 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Creek 8-2 (T26n-R10e-S08 | 0.00 | 2.98 | 2.98 | RIVER | 291000 | Marathon | 2005 | Unknown | CLASS I | ERW | 
| Unnamed | Un Lake |  |  | 1.40 | LAKE | 209400 | Portage |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 7.27 | LAKE | 209500 | Portage | 2011 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 3.74 | LAKE | 209600 | Portage |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.17 | LAKE | 209700 | Portage |  | Unknown |  |  | 
| Unnamed | Unamed |  |  | 0.38 | LAKE | 209800 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.46 | LAKE | 209900 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.68 | LAKE | 210600 | Marathon | 2007 | Unknown |  |  | 
| Unnamed | Unamed |  |  | 7.17 | LAKE | 210700 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 4.55 | LAKE | 210800 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 7.91 | LAKE | 210900 | Marathon | 2011 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 8.97 | LAKE | 211000 | Marathon | 2011 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.45 | LAKE | 211100 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 5.22 | LAKE | 211200 | Marathon | 2010 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.76 | LAKE | 211300 | Shawano |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.95 | LAKE | 211400 | Shawano |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.29 | LAKE | 212400 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 5.29 | LAKE | 288300 | Waupaca | 2011 | Unknown |  |  | 
| Unnamed | Unamed |  |  | 52.97 | LAKE | 290500 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.85 | LAKE | 291200 | Marathon |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 9.31 | LAKE | 1039000 | Marathon | 2011 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 6.00 | LAKE | 1041500 | Marathon | 2012 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 3.40 | LAKE | 5538789 | Marathon |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 20.62 | LAKE | 5539248 | Marathon |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.66 | LAKE | 5541179 | Marathon |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.07 | LAKE | 5541275 | Shawano |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 12.82 | LAKE | 5542340 | Portage | 2011 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.94 | LAKE | 5542729 | Portage |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 3.20 | LAKE | 5543119 | Portage |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 7.83 | LAKE | 5543368 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.45 | LAKE | 5543377 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 5.59 | LAKE | 5543649 | Portage |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 4.93 | LAKE | 5543977 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 11.53 | LAKE | 5544016 | Portage | 2011 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 8.79 | LAKE | 5544043 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 8.49 | LAKE | 5544353 | Waupaca |  | Unknown |  |  | 
| Windorf Lake | Windorf Lake |  |  | 8.52 | LAKE | 241000 | Portage | 2010 | Unknown |  |  |