| Basteen Creek | Basteen Creek | 0.00 | 2.05 | 2.05 | RIVER | 273400 | Waupaca | 2015 | Good | CLASS I | ERW | 
| Bestul Creek | Bestful Creek | 0.00 | 3.10 | 3.10 | RIVER | 277900 | Waupaca | 2025 | Good | CLASS II |  | 
| Black Lake | Black Knutson Lake |  |  | 3.43 | LAKE | 274200 | Waupaca |  | Unknown |  |  | 
| Brekke Lake | Brekke Lake (Bestul) |  |  | 45.73 | LAKE | 183000 | Waupaca | 2025 | Excellent |  |  | 
| Budsberg Lake | Budesberg Lake |  |  | 19.72 | LAKE | 183200 | Portage | 2016 | Good |  |  | 
| Casey Lake | Casey Lake |  |  | 21.35 | LAKE | 273200 | Waupaca | 2020 | Good |  |  | 
| Ebbe Lake | Ebbe Lake |  |  | 1.89 | LAKE | 275000 | Waupaca |  | Unknown |  |  | 
| Engibretson Creek | Engibretson Creek | 0.00 | 3.48 | 3.48 | RIVER | 273300 | Waupaca | 2015 | Good |  |  | 
| Engibretson Creek | Engibretson (Stenson) Creek | 3.49 | 7.28 | 3.79 | RIVER | 273300 | Waupaca | 2015 | Fair | CLASS I | ERW | 
| Foster Lake | Foster Lake |  |  | 7.24 | LAKE | 276900 | Waupaca | 2001 | Unknown |  |  | 
| Graham Lake | Graham Lake (Nelson) |  |  | 54.32 | LAKE | 279300 | Waupaca | 2017 | Good |  | ORW | 
| Grass Lake | Grass Lake |  |  | 36.81 | LAKE | 279500 | Waupaca | 2017 | Unknown |  |  | 
| Grenlie Lake | Grenlie Lake |  |  | 5.90 | LAKE | 276500 | Waupaca | 2021 | Unknown |  |  | 
| Griffin Creek | Griffin Creek | 0.00 | 2.83 | 2.83 | RIVER | 279000 | Portage, Waupaca | 2025 | Poor | CLASS I | ORW | 
| Gurholt Lake | Gurholt Lake |  |  | 31.42 | LAKE | 187000 | Waupaca | 2001 | Unknown |  |  | 
| Herman Lake | Herman Lake |  |  | 5.55 | LAKE | 187500 | Waupaca | 2011 | Unknown |  |  | 
| Iola Lake | Iola Lake (Iola Millpond) |  |  | 220.43 | RESERVOIR | 278800 | Waupaca | 2023 | Good |  |  | 
| Johnson Lake | Johnson Lake |  |  | 13.14 | LAKE | 188900 | Waupaca | 2012 | Good |  |  | 
| Johnson Lake | Johnson Lake |  |  | 4.07 | LAKE | 278500 | Portage |  | Unknown |  |  | 
| Kating Lake | Kating Lake |  |  | 16.43 | LAKE | 189100 | Waupaca | 2017 | Good |  |  | 
| Knutson Lake | Knutson Eickner Lake |  |  | 10.67 | LAKE | 274600 | Waupaca | 2015 | Good |  |  | 
| Leer Creek | Leers Creek | 0.00 | 3.01 | 3.01 | RIVER | 279100 | Waupaca | 2025 | Good | CLASS I | ORW | 
| Little Wolf River | Little Wolf River | 0.00 | 8.76 | 8.76 | RIVER | 272400 | Marathon, Portage, Waupaca | 2025 | Excellent |  | ERW | 
| Little Wolf River | Little Wolf River | 8.76 | 14.02 | 5.26 | RIVER | 272400 | Marathon, Portage, Waupaca | 2018 | Excellent |  | ERW | 
| Long Lake | Long Lake |  |  | 60.99 | LAKE | 191200 | Waupaca | 2016 | Fair |  |  | 
| Marl Lake | Marl Lake |  |  | 15.33 | LAKE | 276300 | Waupaca | 2015 | Good |  |  | 
| Meed Lake | Mead Lake |  |  | 9.83 | LAKE | 275600 | Waupaca | 2016 | Excellent |  |  | 
| Mud Lake | Mud Lake |  |  | 3.25 | LAKE | 277000 | Portage |  | Unknown |  |  | 
| Mud Lake | Mud Lake |  |  | 1.07 | LAKE | 193400 | Waupaca |  | Unknown |  |  | 
| Mud Lake | Mud Lake |  |  | 5.42 | LAKE | 275200 | Waupaca | 2001 | Unknown |  |  | 
| Myklebust Lake | Myklebust Lake |  |  | 20.28 | LAKE | 278100 | Waupaca | 2016 | Excellent |  |  | 
| Nace Creek | Trout (Nace) Creek | 0.00 | 8.12 | 8.12 | RIVER | 278200 | Portage, Waupaca | 2025 | Good | CLASS I | ORW | 
| Nichol Creek | Nichols Creek | 0.00 | 6.87 | 6.87 | RIVER | 274800 | Waupaca | 2025 | Excellent |  |  | 
| Norby Lake | Norby Lake |  |  | 26.59 | LAKE | 194600 | Waupaca |  | Unknown |  |  | 
| North Branch of South Branch Little Wolf River | Little Wolf-N. Branch Of S. Branch | 0.00 | 7.45 | 7.45 | RIVER | 273000 | Waupaca | 2022 | Good |  |  | 
| North Branch of South Branch Little Wolf River | Little Wolf-N. Branch Of S. Branch | 7.45 | 16.66 | 9.21 | RIVER | 273000 | Waupaca | 2007 | Excellent | CLASS II |  | 
| North Lake | North Lake |  |  | 71.51 | LAKE | 279400 | Waupaca | 2025 | Good |  | ORW | 
| Ogdensburg Pond | Ogdensburg Pond |  |  | 64.64 | RESERVOIR | 273800 | Waupaca | 2011 | Excellent |  |  | 
| Olson Creek | Olson Creek | 0.00 | 0.35 | 0.35 | RIVER | 278950 | Waupaca |  | Unknown | CLASS I | ERW | 
| Peterson Creek | Peterson Creek | 0.00 | 8.18 | 8.18 | RIVER | 275400 | Portage, Waupaca | 2025 | Poor | CLASS I | ORW | 
| Peterson Creek | Peterson Creek | 8.18 | 9.32 | 1.14 | RIVER | 275400 | Portage, Waupaca |  | Unknown | CLASS I | ORW | 
| Peterson Creek Millpond | Peterson Creek Millpond |  |  | 2.46 | LAKE | 277400 | Waupaca |  | Unknown |  |  | 
| Rasmussens Lake | Rasmussen'S Lake |  |  | 5.07 | LAKE | 196800 | Waupaca |  | Unknown |  |  | 
| Rich Lake | Rich Lake |  |  | 16.71 | LAKE | 274400 | Waupaca | 2015 | Good |  |  | 
| Rinehart Lake | Rinehart Lake |  |  | 42.86 | LAKE | 278600 | Portage | 2025 | Good |  |  | 
| Rollofson Lake | Rollofson Lake |  |  | 37.45 | LAKE | 277600 | Waupaca | 2017 | Good |  |  | 
| Round Lake | Round Lake |  |  | 8.48 | LAKE | 197500 | Waupaca | 2021 | Unknown |  |  | 
| Sand Lake | Sand (Jensen) Lake |  |  | 13.82 | LAKE | 198000 | Waupaca | 2015 | Good |  |  | 
| Sannes Creek | Sannes Creek | 0.00 | 3.76 | 3.76 | RIVER | 276000 | Portage, Waupaca | 2025 | Good | CLASS I | ORW | 
| Scandinavia Millpond | Scandinavia Millpond |  |  | 11.41 | IMPOUNDMENT | 277800 | Waupaca | 2001 | Unknown |  |  | 
| Shambeau Lake | Shambeau Woodnorth Lake |  |  | 17.32 | LAKE | 198400 | Waupaca | 2016 | Fair |  |  | 
| Siemer Lake | Siemer Lake |  |  | 33.76 | LAKE | 198600 | Waupaca | 2016 | Good |  |  | 
| Silver Lake | Silver Lake |  |  | 70.75 | LAKE | 198800 | Waupaca | 2025 | Excellent |  |  | 
| Skunk Lake | Skunk Lake |  |  | 13.94 | LAKE | 276700 | Waupaca | 2017 | Good |  |  | 
| South Branch Little Wolf River | South Branch Little Wolf | 0.00 | 18.09 | 18.09 | RIVER | 272600 | Waupaca | 2015 | Good |  |  | 
| South Branch Little Wolf River | S. Branch Little Wolf | 18.09 | 32.24 | 14.15 | RIVER | 272600 | Waupaca | 2015 | Good | CLASS II |  | 
| South Branch Little Wolf River | Mack Creek | 33.90 | 37.84 | 3.94 | RIVER | 272600 | Waupaca | 2025 | Good | CLASS I | ERW | 
| South Branch Little Wolf River | Leers Creek | 37.84 | 39.86 | 2.02 | RIVER | 272600 | Waupaca | 2015 | Good | CLASS I | ORW | 
| Spring Pond | Spring Pond |  |  | 3.46 | LAKE | 275900 | Waupaca |  | Unknown |  |  | 
| Thorn Lake | Thorn Lake |  |  | 12.03 | LAKE | 277200 | Portage | 2012 | Excellent |  |  | 
| Un Spring | Un Spring |  |  | 0.94 | LAKE | 237500 | Waupaca |  | Unknown |  |  | 
| Un Spring | Myklebust Lake |  |  | 17.21 | LAKE | 237800 | Waupaca |  | Unknown |  |  | 
| Un Spring | Un Spring |  |  | 2.97 | LAKE | 275800 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.21 | 0.21 | RIVER | 279200 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.22 | 0.22 | RIVER | 5020060 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.24 | 0.24 | RIVER | 5018433 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.27 | 0.27 | RIVER | 5019937 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.30 | 0.30 | RIVER | 5020282 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.31 | 0.31 | RIVER | 5017507 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.31 | 0.31 | RIVER | 5019408 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.39 | 0.39 | RIVER | 5019700 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.43 | 0.43 | RIVER | 5020115 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Cr (T23n R11e-S11) | 0.00 | 0.45 | 0.45 | RIVER | 278000 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.49 | 0.49 | RIVER | 5020234 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.52 | 0.52 | RIVER | 5016956 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.52 | 0.52 | RIVER | 5019712 | Waupaca | 2015 | Unknown |  |  | 
| Unnamed | Un Creek (T23n R12e S17) | 0.00 | 0.53 | 0.53 | RIVER | 273900 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.53 | 0.53 | RIVER | 5016880 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.53 | 0.53 | RIVER | 5018267 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.56 | 0.56 | RIVER | 5018270 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.56 | 0.56 | RIVER | 5020398 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.58 | 0.58 | RIVER | 5020166 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.59 | 0.59 | RIVER | 5019049 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.59 | 0.59 | RIVER | 5019958 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.61 | 0.61 | RIVER | 5018554 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.65 | 0.65 | RIVER | 5019778 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.66 | 0.66 | RIVER | 5016830 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.70 | 0.70 | RIVER | 276600 | Portage, Waupaca | 2017 | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.70 | 0.70 | RIVER | 5016617 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.70 | 0.70 | RIVER | 5018946 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.73 | 0.73 | RIVER | 5019933 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.73 | 0.73 | RIVER | 5019975 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.75 | 0.75 | RIVER | 5019796 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.79 | 0.79 | RIVER | 5019869 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.81 | 0.81 | RIVER | 5019995 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.85 | 0.85 | RIVER | 5016814 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.87 | 0.87 | RIVER | 275100 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.91 | 0.91 | RIVER | 5019887 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.94 | 0.94 | RIVER | 277500 | Portage, Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 0.95 | 0.95 | RIVER | 5017024 | Portage, Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 0.99 | 0.99 | RIVER | 5018820 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.01 | 1.01 | RIVER | 5020094 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 1.02 | 1.02 | RIVER | 5016904 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.04 | 1.04 | RIVER | 5019820 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Cr (T23n R12e S04) | 0.00 | 1.06 | 1.06 | RIVER | 274500 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.14 | 1.14 | RIVER | 5019843 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.14 | 1.14 | RIVER | 5020055 | Waupaca | 2016 | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.21 | 1.21 | RIVER | 280500 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.24 | 1.24 | RIVER | 274900 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.31 | 1.31 | RIVER | 5016411 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.42 | 1.42 | RIVER | 274100 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.43 | 1.43 | RIVER | 5019858 | Waupaca | 2005 | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 1.62 | 1.62 | RIVER | 5017802 | Waupaca | 2024 | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 1.76 | 1.76 | RIVER | 5017285 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 1.76 | 1.76 | RIVER | 5019579 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 1.78 | 1.78 | RIVER | 278300 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water | 0.00 | 2.00 | 2.00 | RIVER | 275300 | Waupaca | 2015 | Unknown | CLASS I |  | 
| Unnamed | Un Cr (T23n R11e S32) | 0.00 | 2.00 | 2.00 | RIVER | 276100 | Waupaca | 2024 | Unknown | CLASS I |  | 
| Unnamed | Unnamed Stream | 0.00 | 2.14 | 2.14 | RIVER | 278900 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unnamed Stream | 0.00 | 4.20 | 4.20 | RIVER | 272700 | Waupaca | 2015 | Fair |  |  | 
| Unnamed | Local Water | 0.01 | 0.85 | 0.84 | RIVER | 4000022 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Creek (T23n R12e S17) | 0.60 | 0.78 | 0.18 | RIVER | 273900 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.47 | LAKE | 203500 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.70 | LAKE | 204200 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.30 | LAKE | 204300 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.28 | LAKE | 204400 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.50 | LAKE | 206200 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 3.99 | LAKE | 206300 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 3.06 | LAKE | 206400 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.66 | LAKE | 206500 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.81 | LAKE | 206600 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.99 | LAKE | 206700 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 8.85 | LAKE | 206800 | Waupaca | 2001 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 5.21 | LAKE | 206900 | Waupaca | 2001 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.66 | LAKE | 207000 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 11.16 | LAKE | 207100 | Waupaca | 2010 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.19 | LAKE | 207200 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 5.39 | LAKE | 207400 | Waupaca | 2010 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 2.01 | LAKE | 208000 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.99 | LAKE | 208100 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.92 | LAKE | 208200 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 3.90 | LAKE | 208300 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 6.27 | LAKE | 208400 | Waupaca | 2012 | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.22 | LAKE | 273500 | Waupaca |  | Unknown |  |  | 
| Unnamed | Unamed |  |  | 1.00 | LAKE | 273600 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 1.86 | LAKE | 274000 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 0.70 | LAKE | 274700 | Waupaca |  | Unknown |  |  | 
| Unnamed | Un Lake |  |  | 6.98 | LAKE | 280600 | Waupaca | 2001 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.22 | LAKE | 5545346 | Portage, Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.87 | LAKE | 5546176 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 4.63 | LAKE | 5546918 | Waupaca | 2005 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.33 | LAKE | 5547412 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.47 | LAKE | 5547482 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.40 | LAKE | 5547784 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 5.24 | LAKE | 5548004 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.43 | LAKE | 5549158 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.83 | LAKE | 5549268 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.20 | LAKE | 5549359 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.20 | LAKE | 5549404 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 4.76 | LAKE | 5549582 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 3.01 | LAKE | 5549610 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.64 | LAKE | 5549794 | Waupaca |  | Unknown |  |  | 
| Unnamed | Local Water |  |  | 15.89 | LAKE | 5549834 | Waupaca | 2016 | Unknown |  |  | 
| Unnamed | Local Water |  |  | 2.79 | LAKE | 5549873 | Waupaca |  | Unknown |  |  | 
| White Lake | White Lake |  |  | 1064.14 | LAKE | 272900 | Waupaca | 2025 | Good |  |  |