| Ahnapee River | Ahnapee River | 0.00 | 7.86 | 7.86 | RIVER | 94800 | Door, Kewaunee | 2024 | Poor | | |
| Ahnapee River | Ahnapee River | 7.86 | 14.71 | 6.85 | RIVER | 94800 | Door, Kewaunee | 2024 | Good | | |
| Algoma Harbor | Algoma Harbor | | | 2.61 | BAY/HARBOR | 51 | Kewaunee | | Good | | |
| Bruemmer Creek | Bruemmer Creek | 0.00 | 1.00 | 1.00 | RIVER | 95300 | Door, Kewaunee | | Unknown | | |
| Bruemmerville Pond | Bruemmerville Millpond | | | 6.00 | LAKE | 95100 | Kewaunee | | Unknown | | |
| East Alaska Lake | East Alaska Lake | | | 50.36 | LAKE | 94200 | Kewaunee | 2024 | Good | | |
| Forestville Flowage | Forestville Flowage | | | 94.02 | IMPOUNDMENT | 95700 | Door | 2024 | Good | | |
| Krohns Lake | Krohns Lake | | | 18.57 | LAKE | 94700 | Kewaunee | 2024 | Good | | |
| Lake Michigan | Crescent Beach, Lake Michigan | 0.00 | 0.68 | 0.68 | GREAT LAKES BEACH | 20 | Brown, Door, Kenosha, Kewaunee, Manitowoc, Marinette, Milwaukee, Oconto, Ozaukee, Racine, Sheboygan | 2023 | Unknown | | |
| Lake Michigan | Lake Michigan | 0.00 | 261.05 | 261.05 | GREAT LAKES SHORELINE | 20 | Brown, Door, Kenosha, Kewaunee, Manitowoc, Marinette, Milwaukee, Oconto, Ozaukee, Racine, Sheboygan | 2024 | Good | | |
| Mashek Creek | Mashek Creek | 0.00 | 5.40 | 5.40 | RIVER | 94000 | Kewaunee | 2019 | Good | | |
| Rio Creek | Rio Creek | 0.00 | 8.77 | 8.77 | RIVER | 95200 | Kewaunee | 2021 | Poor | | |
| Silver Creek | Silver Creek(Havel Creek) | 0.00 | 1.50 | 1.50 | RIVER | 94900 | Kewaunee | 2006 | Good | | |
| Silver Creek | Silver Creek | 0.00 | 6.10 | 6.10 | RIVER | 95900 | Door | 2024 | Fair | | |
| Silver Creek | Silver Creek(Havel Creek) | 1.50 | 7.00 | 5.50 | RIVER | 94900 | Kewaunee | 2024 | Poor | | |
| Silver Creek | Silver Creek(Havel Creek) | 7.00 | 8.20 | 1.20 | RIVER | 94900 | Kewaunee | | Unknown | | |
| Silver Creek | Silver Creek(Havel Creek) | 8.20 | 12.80 | 4.60 | RIVER | 94900 | Kewaunee | 2018 | Good | | |
| Silver Lake | Silver Lake | | | 6.05 | LAKE | 94500 | Kewaunee | 2017 | Fair | | |
| Threemile Creek | Three Mile Creek | 0.15 | 3.40 | 3.25 | RIVER | 94600 | Kewaunee | 2019 | Excellent | CLASS II | |
| Unnamed | Unnamed Creek | 0.00 | 1.89 | 1.89 | RIVER | 5014158 | Door | 2024 | Poor | | |
| Unnamed | Local Water | 0.00 | 1.90 | 1.90 | RIVER | 5016682 | Kewaunee | 2009 | Unknown | | |
| Unnamed | Unnamed | 0.00 | 3.17 | 3.17 | RIVER | 5016797 | Kewaunee | | Unknown | | |
| Unnamed | Unnamed Trib 25n, 25e, 16 Nwne | 0.00 | 3.63 | 3.63 | RIVER | 95450 | Door, Kewaunee | | Unknown | | |
| Unnamed | Unnamed Trib 25n, 25n, 22 Swse | 0.00 | 4.00 | 4.00 | RIVER | 95440 | Kewaunee | 2022 | Fair | | |
| Unnamed | Unnamed Stream | 0.00 | 5.27 | 5.27 | RIVER | 95820 | Door | 2023 | Good | | |
| Unnamed | Local Water | | | 2.74 | LAKE | 5542110 | Kewaunee | | Unknown | | |
| Unnamed | Local Water | | | 6.25 | LAKE | 5542285 | Kewaunee | 2011 | Unknown | | |
| Unnamed | Local Water | | | 2.61 | LAKE | 5544306 | Kewaunee | | Unknown | | |
| Unnamed | Local Water | | | 3.97 | LAKE | 5544852 | Kewaunee | | Unknown | | |
| Unnamed | Local Water | | | 2.15 | LAKE | 5545009 | Kewaunee | | Unknown | | |
| Unnamed | Local Water | | | 3.92 | LAKE | 5545077 | Kewaunee | | Unknown | | |
| West Alaska Lake | West Alaska Lake | | | 26.65 | LAKE | 94300 | Kewaunee | 2024 | Good | | |